Pairwise Alignments

Query, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 325 a.a., carbohydrate isomerase, KpsF/GutQ family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 36/107 (33%), Positives = 58/107 (54%)

Query: 73  VKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDVMKCAAESELLKDVKIDKIMT 132
           VK +  + DA +E+   G  +  +IDE +KL+GI TD D+ +       L+   I  +MT
Sbjct: 215 VKHDICITDALYEISKKGLGMTAIIDEQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMT 274

Query: 133 KSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVK 179
           ++ VTI  +    +A  +M   NI  LIV+D +  P+G +   D+VK
Sbjct: 275 RNCVTITENVLAAQALQVMDSRNINGLIVIDKENHPVGALNMLDMVK 321



 Score = 28.1 bits (61), Expect = 4e-04
 Identities = 20/105 (19%), Positives = 47/105 (44%), Gaps = 14/105 (13%)

Query: 153 KYNIGRLIVLDMDGKPIGMVTEDDIVKKVFKPKTKMTVGELTGNKVPRMAQPVSMIINKP 212
           K  +G   ++D   K +G+ T+ D+ + +               +V     P++ ++ + 
Sbjct: 230 KKGLGMTAIIDEQNKLVGIFTDGDLRRVI-------------DAQVNLRTTPIADVMTRN 276

Query: 213 LITANIGDSVAEVAEILEQQDIRG-IPIFKNDTLRGIVTRLDILK 256
            +T       A+  ++++ ++I G I I K +   G +  LD++K
Sbjct: 277 CVTITENVLAAQALQVMDSRNINGLIVIDKENHPVGALNMLDMVK 321



 Score = 25.4 bits (54), Expect = 0.003
 Identities = 9/35 (25%), Positives = 23/35 (65%)

Query: 5   VIDIATKDVVTVSPDTPISKAVGTMENKKFHNLIV 39
           + D+ T++ VT++ +   ++A+  M+++  + LIV
Sbjct: 269 IADVMTRNCVTITENVLAAQALQVMDSRNINGLIV 303