Pairwise Alignments

Query, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 227 a.a., CBS domain protein/ACT domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 10/117 (8%)

Query: 73  VKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDVMKCAAESE----------LL 122
           V  +T ++ A+  M  +G R  PV+D N KLIGI++D D+ + +              LL
Sbjct: 14  VTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEASPSKATTLDMHELYYLL 73

Query: 123 KDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVK 179
            ++K+  IMT+ P+ +  DE++ +   LM++ +IG + V+D +G+ +G++T+ DI K
Sbjct: 74  SEIKVKDIMTRDPICVQPDETVERVALLMIEKHIGGMPVVDEEGQLVGIITDSDIFK 130



 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 20/124 (16%)

Query: 10  TKDVVTVSPDTPISKAVGTMENKKFHNLIV----------EKDDDIY--------LVTMH 51
           T++V+TV+PDT + KA   M+   F  L V            D DI          + MH
Sbjct: 8   TRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEASPSKATTLDMH 67

Query: 52  DLLLGNSVHQQVEDLMFR-PFCVKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDY 110
           +L    S   +V+D+M R P CV+ +  V   A  MI       PV+DE  +L+GIITD 
Sbjct: 68  ELYYLLS-EIKVKDIMTRDPICVQPDETVERVALLMIEKHIGGMPVVDEEGQLVGIITDS 126

Query: 111 DVMK 114
           D+ K
Sbjct: 127 DIFK 130



 Score = 51.2 bits (121), Expect = 3e-11
 Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 4/129 (3%)

Query: 131 MTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVKKVFKPKTKMTV 190
           MT++ +T+  D S+ KA  LM +    RL VLD +GK IG+V++ DI +      T + +
Sbjct: 7   MTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEASPSKATTLDM 66

Query: 191 GELTGNKVPRMAQPVSMIINKPLITANIGDSVAEVAEILEQQDIRGIPIFKND-TLRGIV 249
            EL           V  I+ +  I     ++V  VA ++ ++ I G+P+   +  L GI+
Sbjct: 67  HEL---YYLLSEIKVKDIMTRDPICVQPDETVERVALLMIEKHIGGMPVVDEEGQLVGII 123

Query: 250 TRLDILKYL 258
           T  DI K L
Sbjct: 124 TDSDIFKVL 132



 Score = 23.5 bits (49), Expect = 0.007
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 10/95 (10%)

Query: 4   QVIDIATKDVVTVSPDTPISKAVGTMENKKFHNLIVEKDDDIYLVTMHDLLLGNSVHQQV 63
           +V DI T+D + V PD  + +    M  K    + V        V     L+G      +
Sbjct: 77  KVKDIMTRDPICVQPDETVERVALLMIEKHIGGMPV--------VDEEGQLVGIITDSDI 128

Query: 64  EDLMFRPFCVKMNTQVIDAAFEMINSGQRVAPVID 98
             ++     V+     +  AFE+ N    + P+ID
Sbjct: 129 FKVLIAITGVRSGG--VQFAFELENKPGTLKPIID 161