Pairwise Alignments

Query, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 150 a.a., CBS domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 16/148 (10%)

Query: 125 VKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIV---KKV 181
           +K   IMT SPVT+  D  I KA  ++++     L V+D  G+ +G++ + D++   KK+
Sbjct: 2   LKARDIMTASPVTVAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDLITQHKKL 61

Query: 182 -----------FKPKTKMTVGELTGNKVPRMAQPVSMIINKPLITANIGDSVAEVAEILE 230
                      F P T M+  EL        A  V   +    +T     ++ E+A ++ 
Sbjct: 62  NIPSFFTVLDGFIPLTSMS--ELDEQMRRISATIVKHAMTADPVTVTPETAIDEIASLMV 119

Query: 231 QQDIRGIPIFKNDTLRGIVTRLDILKYL 258
              +  +P+ +N  L G++ + D+L+ L
Sbjct: 120 DSKLHTLPVVENGKLVGVIGKEDLLRTL 147



 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 34/144 (23%)

Query: 7   DIATKDVVTVSPDTPISKAVGTMENKKFHNLIVEKDD--------DIYLVTMH------- 51
           DI T   VTV+PDT I+KA   +  +KF+ L V  D            L+T H       
Sbjct: 6   DIMTASPVTVAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDLITQHKKLNIPS 65

Query: 52  -----DLLLGNSVHQQVEDLMFR-------------PFCVKMNTQVIDAAFEMINSGQRV 93
                D  +  +   ++++ M R             P  V   T + + A  M++S    
Sbjct: 66  FFTVLDGFIPLTSMSELDEQMRRISATIVKHAMTADPVTVTPETAIDEIASLMVDSKLHT 125

Query: 94  APVIDENDKLIGIITDYDVMKCAA 117
            PV+ EN KL+G+I   D+++  A
Sbjct: 126 LPVV-ENGKLVGVIGKEDLLRTLA 148



 Score = 40.0 bits (92), Expect = 4e-08
 Identities = 30/135 (22%), Positives = 65/135 (48%), Gaps = 26/135 (19%)

Query: 70  PFCVKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDV----------------- 112
           P  V  +T++  AA  ++       PV+D++ +L+G+I   D+                 
Sbjct: 12  PVTVAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDLITQHKKLNIPSFFTVLD 71

Query: 113 --MKCAAESELLKDVK------IDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDM 164
             +   + SEL + ++      +   MT  PVT+  + +I +  SLM+   +  L V++ 
Sbjct: 72  GFIPLTSMSELDEQMRRISATIVKHAMTADPVTVTPETAIDEIASLMVDSKLHTLPVVE- 130

Query: 165 DGKPIGMVTEDDIVK 179
           +GK +G++ ++D+++
Sbjct: 131 NGKLVGVIGKEDLLR 145