Pairwise Alignments

Query, 1081 a.a., carbamoyl-phosphate synthase large subunit from Methanococcus maripaludis S2

Subject, 1073 a.a., carbamoyl-phosphate synthase, large subunit from Pseudomonas stutzeri RCH2

 Score = 1087 bits (2811), Expect = 0.0
 Identities = 559/1070 (52%), Positives = 757/1070 (70%), Gaps = 25/1070 (2%)

Query: 2    KREDIKKVMILGSGPIVIGQAAEFDFSGSQACKSLKEEGIYTILVNSNPATIQTDTNIAD 61
            KR DIK ++ILG+GPIVIGQA EFD+SG+QACK+LKEEG   ILVNSNPATI TD ++AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPSMAD 62

Query: 62   KVYLEPLNPKILEKIIEKEQPDAILPTMGGQTGLNLAMELSKRGILEKHGVELLGSTESV 121
              Y+EP+    + KIIEKE+PDA+LPTMGGQT LN A++L K G+L K GVE++G+    
Sbjct: 63   ATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLAKFGVEMIGANADT 122

Query: 122  IETSEDRDLFNKAMEEINQPIAKSAAVHSVEEAIGATKELGYPAIVRPAFTLGGTGGGIA 181
            I+ +EDR  F+KAM++I      S   H++EEA G   ++G+P I+RP+FT+GGTGGGIA
Sbjct: 123  IDKAEDRSRFDKAMKDIGLACPVSGIAHNMEEAYGVLDKVGFPCIIRPSFTMGGTGGGIA 182

Query: 182  NNEEELIEITKKGLKYSMIKQVLIDQSLLGWKEYEYEVMRDKNDTCIVVCNMENIDPMGI 241
             N EE  EI  +GL  S   ++LID+SL+GWKEYE EV+RDK D CI+VC++EN DPMG+
Sbjct: 183  YNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGV 242

Query: 242  HTGESIVTAPSQTLSDEFHQKLRDASLQIIRHLKIE-GGCNVQFAVNPEMTDYVVIEVNP 300
            HTG+SI  AP+QTL+D+ +Q LR+ASL ++R + +E GG NVQF + P     VVIE+NP
Sbjct: 243  HTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMNP 302

Query: 301  RVSRSSALASKATGYPIAKIAAKIAIGRTLDEIQNDVTK-ETPASFEPTIDYVVVKIPRW 359
            RVSRSSALASKATG+PIAKIAAK+A+G TLDE+ ND+T   TPASFEP IDYVV KIPR+
Sbjct: 303  RVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKIPRF 362

Query: 360  PFDKFRTVDKKLGTSMKSTGEIMAIGRNLEEALQKAVRSLDIGRFGI-----IADGKDKE 414
             F+KF   D +L T MKS GE+MAIGR  +E++QKA+R L++G  G      +AD + + 
Sbjct: 363  AFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFDPKLNLADAEAES 422

Query: 415  YSNSEIVDILEHATDERLFVIAYALDKGWSVDGICERTGINPFFIEKIKKIIDCKKELEV 474
                E    L     +R++ +A A   G +V  + E T I+ +F+ +I+ ++  ++ ++ 
Sbjct: 423  TLKRE----LTVPGADRIWFVADAFRAGKTVAEVFELTRIDEWFLVQIEDLVRDEEHVKT 478

Query: 475  ISRIPVDDEKLKEILLKAKSLGFSDVQISKIFSKTENEIRDLRKRLEVIPVYKMVDTCAA 534
            +    +D    ++++ K K  GFSD +++K+   TE  +R  R +L+V+PVYK VDTCAA
Sbjct: 479  LGLSSID----RDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAA 534

Query: 535  EFEAKTPYYYSAYERYFDEEQNESVSSDRKKVIILGSGPIRIGQGVEFDYSTVHAIFALK 594
            EF   T Y YS YE     E+ E+  S R+K++ILG GP RIGQG+EFDY  VHA  A++
Sbjct: 535  EFATDTAYMYSTYE-----EECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMR 589

Query: 595  ELGIEAIIVNNNPETVSTDYDTSDKLYFEPLVYEEIMNIIENENKNGQLLGVIVQFGGQT 654
            E G E I+VN NPETVSTDYDTSD+LYFEP+  E+++ I+  E    Q  GVIVQ+GGQT
Sbjct: 590  EDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVE----QPKGVIVQYGGQT 645

Query: 655  AINLAMKLYNSGVNILGTSPQSIDLAEDRDQFIHVLEKLKIPQADGATAFSEEQALKVVE 714
             + +   L  +GV I+GTSP +ID AEDR++F  ++++L + Q   ATA SEE+A+   +
Sbjct: 646  PLKICRALEEAGVPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASK 705

Query: 715  RIGYPALVRPSYVLGGRAMQIVYNTEDLKDYMREAVKVSSDHPILIDKFLEEAVEVDVDA 774
             IGYP +VRPSYVLGGRAM+IVY  E+LK YMREAV+VS+D P+L+D FL  A+EVD+DA
Sbjct: 706  AIGYPLVVRPSYVLGGRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDA 765

Query: 775  VCDGESVFIGAIMEHIEEAGIHSGDSACVIPPQTLSKEVIEKIAEHTTKLALELGVIGLL 834
            VCDG  V IG IM+HIE+AG+HSGDSAC +P  +L + + ++I +   K+ALEL VIGL+
Sbjct: 766  VCDGTDVVIGGIMQHIEQAGVHSGDSACSLPAYSLPQHIQDEIRDQVRKMALELDVIGLM 825

Query: 835  NIQYAVKDGVVYIIEANPRASRTIPYVSKSVGVPLAKIATNAIMGKKLKEMGYFGLAKSK 894
            N+Q AV+   +Y++E NPRASRT+P+VSK +G  LAK+A   + GK LKE+G+       
Sbjct: 826  NVQMAVQGEDIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLKEIGFTREIIPT 885

Query: 895  YVSVKEAVFPFLKLPGVDPVLSPEMKSTGEAIGIDQDFGKAFYKSQLSANMELPTSGTVF 954
            Y SVKEAVFPF K PGVD +L PEMKSTGE +G+   F +AF K+QL A+  LPTSG  F
Sbjct: 886  YYSVKEAVFPFAKFPGVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTSGCAF 945

Query: 955  ISVRNRDKDNITKIAKKYHNLGFEIVATRGTARELRLFDIPVREVRKISESMQNSVLDLM 1014
            +SVR  DK  + ++A+    LGFE+VAT GTAR +    +PVR V K++E   + V+D++
Sbjct: 946  LSVREDDKPYVEQVARDLVGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPH-VVDMI 1004

Query: 1015 QKGEVDLIINTSSGDKAKTDGYFIRRAAVELNIPCMTTLQGAYAAIKAIE 1064
            +  EV L+INT+ G ++  D Y IRR A++  I   TT+ G  A  +A++
Sbjct: 1005 KNDEVTLVINTTEGRQSIADSYSIRRNALQHKICITTTIAGGQAICEALK 1054