Pairwise Alignments

Query, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

Subject, 265 a.a., Exodeoxyribonuclease III from Synechococcus elongatus PCC 7942

 Score =  121 bits (303), Expect = 2e-32
 Identities = 81/259 (31%), Positives = 135/259 (52%), Gaps = 16/259 (6%)

Query: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQLG-LDGYFQYWNYAER 59
           M++ +WNVN +R+ L++    +L  ++ DI+C+QETKV   Q  L  L     +   A +
Sbjct: 1   MRIATWNVNSVRSRLEH-LQRWLTDQTLDIVCLQETKVVDEQFPLEPLQALGYHCAIAGQ 59

Query: 60  KGYSGTAIFTKIKPNNV------ILGMEN-SEHNNEGRVITLEFDEYYLVNVYTPN-SQR 111
           K Y+G AI ++    +V      +LG E   + + + RVI+    +  ++N+Y PN S+ 
Sbjct: 60  KSYNGVAILSRQPLADVQIGFGAVLGAEAVGDLDEQKRVISGRSGDLRIINLYVPNGSEL 119

Query: 112 GLTRLEYRQKWDEDFLSYIKTL-ETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEE 170
           G  + +Y+ +W      Y+  L + +  +  CGD N+A ++ D+ +P     +   +P E
Sbjct: 120 GSEKYDYKLRWLTCLQQYLTVLGDRESQIHICGDFNIALEDRDIYDPAGKETHIMSSPTE 179

Query: 171 RNGF-DNIVNSGFLDTFREFNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNLKD 229
           R     ++++ GF+D FR F    D +SWW YR  A  RN GWRID+  +S+S +     
Sbjct: 180 REALRQSVLSLGFVDAFRLFEAGADQFSWWDYRTGAFRRNRGWRIDHHYLSESAKARAIA 239

Query: 230 AYIMPE----VMGSDHCPV 244
            +I  E       SDH PV
Sbjct: 240 CHIDREPRTWEKPSDHTPV 258