Pairwise Alignments

Query, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

Subject, 375 a.a., pseudouridine synthase, RluA family from Pseudomonas stutzeri RCH2

 Score =  132 bits (331), Expect = 2e-35
 Identities = 80/237 (33%), Positives = 131/237 (55%), Gaps = 20/237 (8%)

Query: 78  ENLTLNVIYEDDDLLIVDKSKNMVVHPTKNVLSGTLANAISNHQKINNQNYKIRFVNRLD 137
           +++ L ++YEDD +L++DK   +VVHP      GTL NA+ +H        +   V+RLD
Sbjct: 134 QDIPLEIVYEDDQILVIDKPAGLVVHPAAGHADGTLLNALLHHVPGLINVPRAGIVHRLD 193

Query: 138 MDTTGLLIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSIDLNENGIKR 197
            DTTGL++VAK   +  +L +Q+    + +IY A+V G + +  G I+  I    +G +R
Sbjct: 194 KDTTGLMVVAKTLQAQTRLVEQLQARSVSRIYEAIVIGVI-ITGGTIDAPI--GRHGQQR 250

Query: 198 E---LSNFGKISKTKYKVIEELKNASVLEINLLTGRTHQIRVHLSSTGNYIIGDTLYG-- 252
           +   +   GK + + Y+V+E  ++ + + + L TGRTHQIRVH+   G  ++GD LY   
Sbjct: 251 QRMAVVEGGKPAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMPHLGYPLVGDPLYAGR 310

Query: 253 ------------ETSKLIDRQALHSHILRFIHPITKEKIEIISKLPDDMKNLIKNLK 297
                       +T +   RQALH+  L   HP+T ++++  S LPDD   L+  L+
Sbjct: 311 FRIPPAANPTLVQTLREFPRQALHARFLELDHPVTGQRMKWESPLPDDFVWLLTLLQ 367