Pairwise Alignments

Query, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

Subject, 211 a.a., pseudouridine synthase, RluA family from Pseudomonas stutzeri RCH2

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 58/210 (27%), Positives = 113/210 (53%), Gaps = 10/210 (4%)

Query: 82  LNVIYEDDDLLIVDKSKNMVVHPTKNVLSGTLANAISNHQKINNQNY-KIRFVNRLDMDT 140
           + ++++D  LL+++K   ++  P +        N      ++    Y + R V+RLD +T
Sbjct: 6   IEIVHQDAALLVINKPTLLLSVPGR-----AEDNRDCLVTRLQENGYPEARIVHRLDWET 60

Query: 141 TGLLIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSIDLNENGIKRELS 200
           +GL+++A+++ +H++L++Q  +   EK Y A+  G  +   G I+  +  +     R + 
Sbjct: 61  SGLIVLARDADTHRELSRQFHDRETEKAYTALCWGEPEQDSGSIDLPLRYDPPTKPRHVV 120

Query: 201 N--FGKISKTKYKVIEELKNASVLEINLLTGRTHQIRVHLSSTGNYIIGDTLYGETSKL- 257
           +   GK + T ++V+E   + S +E+  +TGR+HQ+RVH+ S G+ ++GD LY     L 
Sbjct: 121 DHELGKHALTFWRVLERCGDYSRVELTPITGRSHQLRVHMLSIGHPLLGDRLYAHEQALQ 180

Query: 258 -IDRQALHSHILRFIHPITKEKIEIISKLP 286
             +R  LH+ +L   HP T E++      P
Sbjct: 181 AHERLCLHASMLTLTHPQTGERLRFECPAP 210