Pairwise Alignments

Query, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

Subject, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 9/201 (4%)

Query: 77  PENLTLNVIYEDDDLLIVDKSKNMVVHPTKNVLSGTLANAISNHQKINNQNYKIRFVNRL 136
           P++  ++VIYED+ ++  +K   ++  P + V      +  S   ++ +    ++ V+RL
Sbjct: 9   PKDPWIDVIYEDEHIIAANKPSGLLSVPGRPV-----EHYDSMWARLVDYCPDVKVVHRL 63

Query: 137 DMDTTGLLIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSI--DLNENG 194
           DM T+GL++ AK  +    L KQ    +  KIY A V G ++  EG +   +  D     
Sbjct: 64  DMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRP 123

Query: 195 IKRELSNFGKISKTKYKVIEELKNASVLEINLLTGRTHQIRVHLSSTGNYIIGDTLYG-- 252
            ++     G+ S T+Y+V++  +  +V+ +  +TGR+HQ+RVH+ S G+ I+GD LY   
Sbjct: 124 KQKVCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPP 183

Query: 253 ETSKLIDRQALHSHILRFIHP 273
           E  +  DR  LH+  L F HP
Sbjct: 184 EAVEFADRLQLHAAELCFYHP 204