Pairwise Alignments

Query, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

Subject, 298 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis JJ

 Score =  525 bits (1351), Expect = e-154
 Identities = 268/297 (90%), Positives = 280/297 (94%)

Query: 1   MECQKKILNLTVDSKIAGNKLIDVLKDNFELSNKMIKKFDKENKIFVNSKNISLKSKLKE 60
           ME QKKIL LTVDSKI GNKLIDVLKDNFELSNKMIKKFDKENKIFVNSKNISLKSKLKE
Sbjct: 1   MESQKKILKLTVDSKIVGNKLIDVLKDNFELSNKMIKKFDKENKIFVNSKNISLKSKLKE 60

Query: 61  NETVSVEIDYGINNITPENLTLNVIYEDDDLLIVDKSKNMVVHPTKNVLSGTLANAISNH 120
           NETV VEID GIN I PENL LN+IYEDDDLLIVDK KNMVVHPTKNVLS TLANA+SNH
Sbjct: 61  NETVYVEIDCGINTIDPENLALNIIYEDDDLLIVDKPKNMVVHPTKNVLSKTLANAVSNH 120

Query: 121 QKINNQNYKIRFVNRLDMDTTGLLIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLK 180
           QKINNQNYKIRFVNRLDMDTTGLLI+AK+ YSHQ+LAKQMDEGILEKIYIAVVNGHLDLK
Sbjct: 121 QKINNQNYKIRFVNRLDMDTTGLLIIAKDPYSHQRLAKQMDEGILEKIYIAVVNGHLDLK 180

Query: 181 EGIIEDSIDLNENGIKRELSNFGKISKTKYKVIEELKNASVLEINLLTGRTHQIRVHLSS 240
           EGIIEDSIDLN++GIKRELSN GKISKTKYKVIEELKNAS+LEI LLTGRTHQIRVHLSS
Sbjct: 181 EGIIEDSIDLNDDGIKRELSNVGKISKTKYKVIEELKNASILEIKLLTGRTHQIRVHLSS 240

Query: 241 TGNYIIGDTLYGETSKLIDRQALHSHILRFIHPITKEKIEIISKLPDDMKNLIKNLK 297
           TGNYIIGDTLYGE S LI+RQALHS+ILRFIHPITKEK+E  SKLPDDM+NLIKNLK
Sbjct: 241 TGNYIIGDTLYGEISNLIERQALHSYILRFIHPITKEKMEFSSKLPDDMENLIKNLK 297