Pairwise Alignments

Query, 418 a.a., dihydroorotase from Methanococcus maripaludis S2

Subject, 479 a.a., Dihydropyrimidinase (EC 3.5.2.2) (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  141 bits (356), Expect = 4e-38
 Identities = 120/446 (26%), Positives = 194/446 (43%), Gaps = 44/446 (9%)

Query: 2   VLLKNGKIVSENKITESDILIEDGIIQKIEKNIDYSG--ETIDLKGNYVFPGFIDSHVHF 59
           +L++   +++ ++   +D+   DG+I+ I  N+D     E +D  G Y+ PG ID H H 
Sbjct: 3   LLIRGATVITHDESYRADVFCADGVIKAIGDNLDVPAAVEVLDGGGQYLMPGGIDPHTHM 62

Query: 60  R---WGNPEKEDFLSGSEAAIAGGIVYAIDMPNNTPPVTTKEIFYKKMKEGNEKSKINLY 116
           +    G    EDF SG+ A +AGG    ID     P  +  E F++  +   EKS  +  
Sbjct: 63  QLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPQQSLMEAFHQ-WRGWAEKSASDYG 121

Query: 117 FAYGVT--------ENNYLENVEEAIFYKIFM-----VKSVGDLFISDYSKLREILDQNK 163
           F   +T        E   L N      +K FM     + +  D  ++ + +  E+     
Sbjct: 122 FHVAITWWSEQVREEMAELVNHHGVNSFKHFMAYKNAIMAADDTLVASFERCLEL---GA 178

Query: 164 IFAIHAEHKNVILENSKKYELNSFKN---HCKIRSRESEIEAVKEVLEVLQKIDKESKNK 220
           +  +HAE+  ++    +K           H   R  + E EA    + + + +       
Sbjct: 179 VPTVHAENGELVYHLQRKLLAQGITGPEAHPLSRPSQVEGEAASRAIRIAETLGTP---- 234

Query: 221 PNVHFCHISVKEALDLIKNAKKTFKNVKVTVEVSPHHLFLNSKMAED----LKGCGKFNP 276
             ++  H+S KEALD I  A+   K   V  EV   HL L+  +  D           +P
Sbjct: 235 --LYLVHVSTKEALDEITYARS--KGQPVYGEVLAGHLLLDDSVYRDPDWQTAAGYVMSP 290

Query: 277 PLREEADNLALLNGIIDGTVDVVATDHAPHLLNEKL---NVVEKCPSGIPGIETLVPLIM 333
           P R      AL +G+  G +   ATDH      +K    +   K P+G  GIE  + ++ 
Sbjct: 291 PFRPRGHQEALWHGLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLW 350

Query: 334 NL-VNEGKISIFDAYRVLSKNPSKIFKI---NNKIEIGNSANMTVVDMDKEYKISAKDFK 389
           +  VN GK+S+ D   + S N +KIF +      I +G  A++ + D      ISAK   
Sbjct: 351 DEGVNSGKLSMHDFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQGSRTISAKTHH 410

Query: 390 SKAKFTPFEGKTVKGKPFATLVNGKI 415
            +  F  FEGKTV+G P  T+  G++
Sbjct: 411 QQVDFNIFEGKTVRGVPSHTISQGRL 436