Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 288 a.a., 16S rRNA dimethylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  113 bits (283), Expect = 4e-30
 Identities = 74/215 (34%), Positives = 112/215 (52%), Gaps = 6/215 (2%)

Query: 5   KKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKELAKI-AKKVYVIELDERL 63
           + LGQ FL D N   +        +   V+E+G G G LT+ L    A++V  IE D R 
Sbjct: 32  RSLGQNFLFDLNLTGRIARAGGEIDQGTVIEIGPGPGGLTRALLGAGARRVIAIERDSRC 91

Query: 64  KPFADEITAEFEN-VEIIWSDALKVDLKNLGF--NKIVANLPYQISSPITFKFLEED--F 118
           +    EI A +   +E I  DAL +D+  LG    +++ANLPY +++P+   +L     F
Sbjct: 92  RGVLAEIAAVWPGRLETIEGDALDIDVAALGEAPRRVIANLPYNVATPLLIGWLRHASAF 151

Query: 119 ETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSAIVK 178
           E  VLM+Q E   R+A +P TK+Y RLSV  Q+  +V  +  V P AF+P P V S +V+
Sbjct: 152 ERFVLMFQKEVVDRLAARPGTKDYGRLSVITQWLCEVRPLFDVNPRAFTPPPKVVSTVVR 211

Query: 179 LTKREPKYHVKDEEFFKKVLKAVFQHRNRTIKRAL 213
           +  R         E  ++V  A F  R + ++ +L
Sbjct: 212 IDPRPQPLAPARMETLERVTAAAFGQRRKMLRASL 246