Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 281 a.a., dimethyladenosine transferase KsgA from Phaeobacter inhibens DSM 17395

 Score =  119 bits (297), Expect = 9e-32
 Identities = 83/235 (35%), Positives = 126/235 (53%), Gaps = 10/235 (4%)

Query: 5   KKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKEL-AKIAKKVYVIELDERL 63
           K LGQ FL D N   K   +A   +   VLE+G G G LT+ L A+ A++V  +E D R 
Sbjct: 23  KSLGQNFLLDLNLTAKIARQAGDLSECDVLEIGPGPGGLTRGLLAEGARRVLAVEKDSRC 82

Query: 64  KPFADEITAEFEN-VEIIWSDALKVD-LKNLGFN-KIVANLPYQISSPITFKFLEED--- 117
            P   EI+  +   +++I  DAL+V+ L +L    +I ANLPY + + +  ++L      
Sbjct: 83  IPALAEISDAYPGRLQVIEGDALEVNPLTHLTPPIRIAANLPYNVGTELLVRWLTPKAWP 142

Query: 118 --FETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSA 175
             +++  LM+Q E A+R+   P +K Y RL++  Q+ AD   +  +PP AFSP P V+SA
Sbjct: 143 PFWQSLTLMFQREVAERIVAVPGSKAYGRLALLAQWRADARIVLSLPPEAFSPPPKVHSA 202

Query: 176 IVKLTKREPKYHVKDEEFFKKVLKAVFQHRNRTIKRALIDSSHEIEVDRDNLKGI 230
           +V L   E   +  D     KV+ A F  R + ++ +L   S +IE D  N  GI
Sbjct: 203 VVHLKALEAPRYPADAGTLNKVVAAAFNQRRKMLRASLKSVSPDIE-DHLNAVGI 256