Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 269 a.a., dimethyladenosine transferase (RefSeq) from Shewanella loihica PV-4

 Score =  122 bits (307), Expect = 6e-33
 Identities = 75/216 (34%), Positives = 111/216 (51%), Gaps = 7/216 (3%)

Query: 5   KKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKELAKIAKKVYVIELDERLK 64
           K+ GQ FL D N + + +      N+ +++E+G G  ALT+ +A+   K+ V+ELD+ L 
Sbjct: 13  KRFGQNFLTDSNVINRIVGAISPDNDHVMVEIGPGLAALTEPVAESIDKLTVVELDKDLV 72

Query: 65  PFADEITAEFENVEIIWSDALKVDLKNLGFN----KIVANLPYQISSPITFKFLE--EDF 118
                     + +EI   DALK D K L       K+  NLPY IS+P+ F   E  E  
Sbjct: 73  ERLQTHPFLKDKLEIHQGDALKFDFKQLVEEGKQMKVFGNLPYNISTPLMFHLFEFAEHI 132

Query: 119 ETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSAIVK 178
           E    M Q E   R++  P TK Y RL+V  QY   V  + +VPP  F+P P V+SA+V+
Sbjct: 133 ENMHFMLQKEVVLRLSAAPGTKAYGRLTVMAQYFCQVMPVLEVPPGCFTPPPKVDSAVVR 192

Query: 179 LTK-REPKYHVKDEEFFKKVLKAVFQHRNRTIKRAL 213
           L   +E  Y  KD +  + +    F  R +T++  L
Sbjct: 193 LVPYKEKPYPCKDVDLLRHLCTTAFNMRRKTLRNNL 228