Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 317 a.a., Probable dimethyladenosine transferase KsgA (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (high level kasugamycin resistance protein KsgA) (kasugamycin dimethyltransferase) from Mycobacterium tuberculosis H37Rv

 Score = 99.4 bits (246), Expect = 9e-26
 Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 12/225 (5%)

Query: 2   RQSKKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKELAKIAKKVYVIELDE 61
           R  K LGQ F+ D N V++ +  + ++ +D+VLEVG G G+LT  L      V  +E+D 
Sbjct: 29  RPRKSLGQNFVHDANTVRRVVAASGVSRSDLVLEVGPGLGSLTLALLDRGATVTAVEIDP 88

Query: 62  RLKPFADEITAEFENVE-----IIWSDALKVDLKNLGF--NKIVANLPYQISSPITFKFL 114
            L     +  AE  + E     ++  D L +  ++L      +VANLPY ++ P     L
Sbjct: 89  LLASRLQQTVAEHSHSEVHRLTVVNRDVLALRREDLAAAPTAVVANLPYNVAVPALLHLL 148

Query: 115 EE--DFETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDV 172
            E        +M Q E A+R+A +P +KEY   SV +++   V     V P+ F P P V
Sbjct: 149 VEFPSIRVVTVMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCGMVSPTVFWPIPRV 208

Query: 173 NSAIVKLTKREPKYHVKDEEFFKKVLKAV---FQHRNRTIKRALI 214
            S +V++ + E      D+ F ++V + V   F  R +T + A +
Sbjct: 209 YSGLVRIDRYETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFV 253