Pairwise Alignments

Query, 250 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 406 a.a., Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly from Pseudomonas fluorescens FW300-N2E2

 Score = 50.1 bits (118), Expect = 7e-11
 Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 22/208 (10%)

Query: 1   MIIAVTGKGGVGKTLLSSLIIRNLTKSGKNILAIDADPDSNLPEALGVEVTKTVGDAREE 60
           +I  ++ KGG G TL++  + + L+    N L +D D            VT  +  A+  
Sbjct: 148 LIAVISAKGGSGGTLVACNLAQQLSARAGNTLLLDMDLQFG-------SVTHYLDVAQSH 200

Query: 61  LKKEVKSGNTSPEMDMWNSLDYKIMESIIETPEFDLLVMGRPEGSGCYC--AVNNMLRKI 118
              EV        +   + +D   +          L V+G   G  C    A    L  +
Sbjct: 201 SHLEV--------LQQIDDMDSVALRGFCSHFSPTLHVLGGRAGELCLPQDAQPEQLDAL 252

Query: 119 IETVSSNYDIVVIDTEAGLEHLSRRTTQNVDTLLVVTDSSKRGILTASR-IKELAKELDI 177
           ++   ++YD VV+D    ++HL+    + VD + VV   S   +  AS  ++ L ++L +
Sbjct: 253 LQLARTSYDWVVVDLPRQIDHLTGSVLEQVDRVYVVVQQSVSHLRDASALVRILREDLGV 312

Query: 178 SFKNLYLVLNRIKPENEENVRETVKDFG 205
               L +V+NR     ++N   ++KD G
Sbjct: 313 RGDQLQIVINRY----DKNAAVSLKDIG 336