Pairwise Alignments

Query, 250 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 260 a.a., AAA family ATPase from Methanococcus maripaludis JJ

 Score =  136 bits (342), Expect = 5e-37
 Identities = 96/261 (36%), Positives = 153/261 (58%), Gaps = 17/261 (6%)

Query: 1   MIIAVTGKGGVGKTLLSSLIIRNLTKSGKNILAIDADPDSNLPEALGVEVTKTVGDAREE 60
           M IA+TGKGGVGKT  S  +   L++  K + AIDADPD NL  +LG+    T     +E
Sbjct: 1   MKIAITGKGGVGKTTFSGTLACILSEKYK-VYAIDADPDMNLASSLGITDKITPISKMKE 59

Query: 61  LKKE---VKSGNTSPEMDMWN----SLDYKIMESIIETPEFDLLVMGRPE--GSGCYCAV 111
           L KE    + G++  E+   N     L  K+  +  +     ++VMG  E  G+GC C  
Sbjct: 60  LIKERTGAEQGSSFGEVFKINPKTSDLPEKLSVNYDKQGNLKIMVMGTVEKGGTGCVCPA 119

Query: 112 NNMLRKIIETVSSNYD-IVVIDTEAGLEHLSRRTTQNVDTLLVVTDSSKRGILTASRIKE 170
           + +L+ +I  +    D +V++D EAG+EHL R+T + VD ++VV+++S + + T  RIK+
Sbjct: 120 SVLLKALIRNLILKKDEVVILDMEAGIEHLGRKTAEAVDVMIVVSEASSKSMETVERIKK 179

Query: 171 LAKELDISFKNLYLVLNRIKPENEEN-VRETVKDFGLDIIGII-YDDELTASYDMEGKPL 228
           LA+E+ I  K +  VLN+I  E E++   E +   GL+I+G I YD E++ + DM+ +PL
Sbjct: 180 LAEEIGI--KKIVCVLNKISNETEKSFASENLNRIGLEILGCIPYDPEVSVA-DMKREPL 236

Query: 229 FELPDDSETVNSVSKIVEKIL 249
            +  ++S+    + KI EKI+
Sbjct: 237 VKY-ENSKAHIEIRKISEKIM 256