Pairwise Alignments

Query, 250 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 293 a.a., carbon monoxide dehydrogenase accessory protein CooC, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 82.8 bits (203), Expect = 7e-21
 Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 16/202 (7%)

Query: 1   MIIAVTGKGGVGKTLLSSLIIRNLTKSGKNILAIDADPDSNLPEALGVEVTKTVG---DA 57
           M +A  GKGG GKT L++     L + G N+  IDAD   +L  A G+  T       + 
Sbjct: 1   MKLAFAGKGGAGKTTLTAWTADYLARHGHNVWLIDADTALSLGRASGLARTDLPAPLINR 60

Query: 58  REELKKEVKSG--NTSPEM-DMWNSLDYKI-----MESIIETPEFDLLVMGR--PEGSGC 107
            + + + + SG  N +P++ D+  +L   +       + +      LLVMG     G GC
Sbjct: 61  HDIIMERISSGLINLTPDVEDLPEALSVAVPLGGPTVTGVAAGRKRLLVMGSITHAGGGC 120

Query: 108 YCAVNNMLRKII-ETVSSNYDIVVIDTEAGLEHLSRRTTQNVDTLLVVTDSSKRGILTAS 166
            C  N +L+ ++   V    + V++D EAG+EHL R T   VD L+VV++ S R + TAS
Sbjct: 121 ACEANALLKALLAHLVYDRDEWVLVDLEAGVEHLGRGTVAMVDALVVVSEPSLRSLETAS 180

Query: 167 RIKELAKELDISFKNLYLVLNR 188
            I +LA  L +      L LNR
Sbjct: 181 EISQLATGLGL--PRQVLALNR 200