Pairwise Alignments

Query, 154 a.a., 4Fe-4S dicluster domain-containing protein from Methanococcus maripaludis S2

Subject, 230 a.a., NrfC, Fe-S-cluster-containing hydrogenase component 1 (RefSeq) from Shewanella amazonensis SB2B

 Score = 82.8 bits (203), Expect = 3e-21
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 20/151 (13%)

Query: 2   KSLMVVDARKCTECNDCIEACKKQHGVARAIK--------------TQSIPMFCLQC-HP 46
           K  MV D   C  CN C++AC++ + +   +                QS     + C H 
Sbjct: 43  KYAMVHDENACIGCNACVQACRETNQIPEGVTRVKIERRGPFGEYPNQSYRFSRVSCQHC 102

Query: 47  DKAPCKQVCPVNA--IEELDGALVVNEESCILCRLCMVACPVGALTINKDAKSVQKCTLC 104
           + APC +VCP  A  I++  G + VN + C+ C+ C+ ACP     I+ + ++  KC  C
Sbjct: 103 EAAPCVRVCPTGAAYIDKETGIVAVNSDRCVGCQYCIAACPYQVRYIHPETRTADKCDFC 162

Query: 105 MET---DRMLPACVEACKSNVLKLFSVEDLE 132
            ++     + PACVEAC +  L   +++D E
Sbjct: 163 QKSRLAQGLQPACVEACPTKALTFGNLKDPE 193



 Score = 25.0 bits (53), Expect = 8e-04
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 59 AIEELDGALVVNEESCILCRLCMVAC 84
          A  E   A+V +E +CI C  C+ AC
Sbjct: 38 AESETKYAMVHDENACIGCNACVQAC 63