Pairwise Alignments

Query, 260 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 293 a.a., carbon monoxide dehydrogenase accessory protein CooC, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  136 bits (343), Expect = 4e-37
 Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 19/209 (9%)

Query: 1   MKIAITGKGGVGKTTFSGTLACILSEK-YKVYAIDADPDMNL--ASSLGITEKITPISKM 57
           MK+A  GKGG GKTT +   A  L+   + V+ IDAD  ++L  AS L  T+   P+   
Sbjct: 1   MKLAFAGKGGAGKTTLTAWTADYLARHGHNVWLIDADTALSLGRASGLARTDLPAPLINR 60

Query: 58  KDLIKERTCAEQGSSFGEVFKINPKTSDLPEKLSVNYDKNG---------NLKIMVMGTV 108
            D+I ER  +        +  + P   DLPE LSV     G           +++VMG++
Sbjct: 61  HDIIMERISSG-------LINLTPDVEDLPEALSVAVPLGGPTVTGVAAGRKRLLVMGSI 113

Query: 109 EKGGTGCVCPASVLLKALIRNLILKKDEVVILDMEAGIEHLGRKTAEAVDVMIIVSEASS 168
              G GC C A+ LLKAL+ +L+  +DE V++D+EAG+EHLGR T   VD +++VSE S 
Sbjct: 114 THAGGGCACEANALLKALLAHLVYDRDEWVLVDLEAGVEHLGRGTVAMVDALVVVSEPSL 173

Query: 169 KSMETVERIKKLAEEIGIKKIVCVLNKIS 197
           +S+ET   I +LA  +G+ + V  LN+ S
Sbjct: 174 RSLETASEISQLATGLGLPRQVLALNRHS 202