Pairwise Alignments

Query, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

Subject, 562 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Pseudomonas fluorescens FW300-N2E2

 Score =  100 bits (250), Expect = 1e-25
 Identities = 130/522 (24%), Positives = 223/522 (42%), Gaps = 62/522 (11%)

Query: 72  AVKTTGIPEKDLKSKIKETGDIGTAVENLSSNIKQVSLFSQALTLEEVYSTLKKLSEIEG 131
           AV+ +G+     +   +  GD+   +  +       S    AL +EE      KL  + G
Sbjct: 61  AVQVSGLSLWLFEESYQAVGDLAETISLVLPESPHSSDEGLALWIEE------KLLPLRG 114

Query: 132 NSSQKKKTRIISNLLILADPVESRYISRLILEDMRIGMNIPTILASFSNYFNVNKESVEK 191
            S      R+ + L    D        +LI    R+G++   +  + +   N++ + V +
Sbjct: 115 ESPGVLAERLPA-LWAQLDRPSLMLCIKLITGSFRVGVSKLLVTRALAGMVNLDSKRVAQ 173

Query: 192 IYAVTNDIGLLGE-----KLISGSDIENDPELKLKVFRPIKPMLAQ-LTPSIE--DAMIE 243
                 D+          KLI+    E+D E   +  +P    LA  L+  +E  D ++ 
Sbjct: 174 RLVGYTDLSHRPTAASYLKLIAA---ESDDEHAQRGGQPYPFFLAHALSAPVEQFDTLLG 230

Query: 244 TKMP-QFETKYDGARVQVHKSNGDVKIYSRRLENITNSVPELVEEIKKLDIDNIILEGEC 302
                Q E K+DG R QV K +G + ++SR  + +T   PEL    + L  D  +++GE 
Sbjct: 231 PASDWQVEWKWDGIRAQVIKRDGHLWVWSRGEDLVTERFPELHSLAQALP-DGTVIDGEI 289

Query: 303 V-----------AMDLDSGKP---RPFQDILRRFRRKYNIDKMAEKIALRIYFFDVL-YY 347
           V           A D D+      +PF  + +R  RK    K+ +   + +  +D+L + 
Sbjct: 290 VVWKAPQSVTEDAFDPDAPLQPAVQPFVLLQQRIGRKTLGKKILDDAPVVVMAYDLLEWQ 349

Query: 348 NRGLIDTPLKTRREILEKLFGTNNWDSELEKIKKEIFSSKMLFSSFKLNSGDPNLVKEFF 407
                  P   RRE +E L                   S +L  S  +   D   +    
Sbjct: 350 GEDWRSRPQAERREQVEALIAR--------------VRSPVLLPSPTVTGQDWFDLARQR 395

Query: 408 NWSLSIGHEGIMIKNPDAPYTPGSRVKTM-----YKVKPTLENLDVVVTRAKIGMGKRKD 462
             S  +G EG+M+K  +A Y  G R K M     +KV P   ++D V+  A+ G G+R  
Sbjct: 396 EGSRRLGVEGMMLKARNALYGVG-RTKDMGVWWKWKVDPF--SVDAVLIYAQRGHGRRAS 452

Query: 463 WYGSYELSVKDN-----DGNLHVIGNVGSGLTEDDLEKLTKIVNEIKIEDLGEEVILEPK 517
            Y  Y  +V DN     +  L       SGLT+ ++ ++  IV +  +E  G    + P 
Sbjct: 453 LYSDYTFAVWDNPPDSRERTLVPFAKAYSGLTDAEMRQVDNIVRKTTVEKFGPVSSVTPT 512

Query: 518 IVLEVTYEEIQTSEKYEMGYALRFPRVVQIREDKSINDINTL 559
           +V E+ +E I  S +++ G A+RFPR+++ R+DK++ + +TL
Sbjct: 513 LVFELGFEGIALSNRHKSGIAVRFPRMLRWRQDKTVEEADTL 554