Pairwise Alignments

Query, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

Subject, 537 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  117 bits (292), Expect = 2e-30
 Identities = 99/336 (29%), Positives = 160/336 (47%), Gaps = 38/336 (11%)

Query: 250 ETKYDGARVQVHKSNGDVKIYSRRLENITNSVPELVEEIKKLD-IDNIILEGECVAMDLD 308
           E K+DG RVQ+    G  ++YSR  + I+++ PE++E       ID  +L G  +  +  
Sbjct: 225 EWKWDGIRVQLANVGGARRLYSRSGDEISSAFPEIIEAADITGVIDGELLVGGTMRSNRA 284

Query: 309 SGKPRPFQDILRRFRRKYNIDKMAEKIALRIYFFDVLYYN-RGLIDTPLKTRREILEKLF 367
           +G    F D+ +R  RK    K+ ++    I  +D+L+   R +   P + RRE L  L 
Sbjct: 285 TGT---FADLQQRLNRKTVSRKLMDEYPAFIRAYDILFSGERDIRPEPFRVRREALSSL- 340

Query: 368 GTNNWDSELEKIKKEIFSSKML--FSSFK----LNSGDPNLVKEFFNWSLSIGHEGIMIK 421
                   +E    + F    L  FSS+K    L S  P+ V E           G+M+K
Sbjct: 341 --------IEAASPQHFDLSPLVGFSSWKELDELRSSPPDPVIE-----------GVMLK 381

Query: 422 NPDAPYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMGKRKDWYGSYELSV--KDNDG-NL 478
             D+PY  G      +K K    N+D V+  A+ G GKR  +Y  +   V  +  DG +L
Sbjct: 382 RLDSPYMAGRAKGPWFKWKRAPFNIDAVLMYAQRGHGKRSSYYSDFTFGVWAEGEDGASL 441

Query: 479 HVIGNVGSGLTEDDLEKLTKIVNEIKIEDLG--EEVILEPK--IVLEVTYEEIQTSEKYE 534
             +G    G T+ +LE L + V +  +E  G    V  EP    V+EV +E +  S +++
Sbjct: 442 VPVGKAYFGFTDAELEVLDRFVRDNTVERFGPVRAVRAEPDSGFVVEVAFEGLNRSTRHK 501

Query: 535 MGYALRFPRVVQIREDKSINDINTLDDVKKIYEIER 570
            G A+RFPR+ ++R DK   D + L+ ++ +   +R
Sbjct: 502 SGVAMRFPRIARLRPDKLPRDADRLETLQAMMGTQR 537