Pairwise Alignments

Query, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

Subject, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 80/312 (25%), Positives = 144/312 (46%), Gaps = 43/312 (13%)

Query: 225 PIKPMLAQLTPSIEDAMIETKMPQ-----FETKYDGARVQVHKSNGDVKIYSRRLENITN 279
           P  PM  ++ P +  A+++   P+     FE K+DG R+ +H     V+I +R   + T+
Sbjct: 31  PFDPMAERIEPCL--ALLKPVPPKGPDWVFEVKWDGYRLAIHIEPKGVRIITRGGHDWTH 88

Query: 280 SVPELVEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILRRFRRKYNIDKMAEKIALRI 339
             P + E   KL +   IL+GE V +D + G+   F  + R    +       E +    
Sbjct: 89  RFPAIAEATSKLGVGTAILDGEAVVLD-EEGR-SDFGALQRSLGGRGGKRSSTESV---F 143

Query: 340 YFFDVLYYN-RGLIDTPLKTRREILEKLFGTNNWDSELEKIKKEIFSSKMLFSSFKLNSG 398
           + FD+LY++   L  T L  RR +LE           L+     I SS+ +F       G
Sbjct: 144 FAFDLLYFDGHDLSGTELSVRRHLLEGF---------LDGPTGAIQSSEEVF-------G 187

Query: 399 DPNLVKEFFNWSLSIGHEGIMIKNPDAPYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMG 458
           D  L+++    + S+G +GI+ K+ D PY  G R     K+K  L++   ++   +  + 
Sbjct: 188 DGALLEK----ACSMGLKGIIAKHRDWPYRSG-RTGDWLKIK-CLQSESFMIVGYEQSLT 241

Query: 459 KRKDWYGSYELSVKDNDGNLHVIGNVGSGLTEDDLEKLTKIVNEIK-----IEDLGEEVI 513
            R    GS  L+ +     ++V G+VG+G    D E L K ++ +K     +   G+ ++
Sbjct: 242 AR-GGLGSLLLAGRKGHDWIYV-GSVGTGFNTKDAEYLRKTLDRLKTSKPAVPLKGKNLV 299

Query: 514 L-EPKIVLEVTY 524
             +P ++ E+ +
Sbjct: 300 FAQPTLIAEIEF 311