Pairwise Alignments

Query, 239 a.a., aquaporin family protein from Methanococcus maripaludis S2

Subject, 229 a.a., aquaporin Z (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  130 bits (326), Expect = 3e-35
 Identities = 84/243 (34%), Positives = 129/243 (53%), Gaps = 25/243 (10%)

Query: 3   MIKKLIAECLGTGILVFFGPGAAAMTLMIANNTGTAGIGLLGGLGDWFAIGFSFAIAIAA 62
           M +K+ AE LGT  LV  G G+A +           GIGLLG       +  +F + +  
Sbjct: 1   MSQKMAAEFLGTLWLVLGGCGSAVLAAAFPE----VGIGLLG-------VSLAFGLTVLT 49

Query: 63  VIYTMGRISGAHINPAVTIGLWAVKKFPTKDTVLYIIAQLIGAAIGS-LLFFACIGIDSV 121
           + + +G ISG H+NPAV+ GLWA  +FPT + + YIIAQ+ G   G+ +L+    G +  
Sbjct: 50  MAFAIGHISGCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGAGVLYLIASGQEGF 109

Query: 122 TI------GGLGATAPFAGISYFQAILAEFIGTFLLMFVIMGVAVDKRAPDGFAGLVIGL 175
           ++       G G  +P  G S    ++ E + T   + VI+G + D+RAP GFA + IGL
Sbjct: 110 SLAAGFASNGFGEHSP-GGYSMISVMICEIVMTLFFLLVILG-STDERAPKGFAPIAIGL 167

Query: 176 TVGAIITTTGNIAGASLNPARTFGPYLIDSIYGLN-LWYYFPIYIIGPVLGAIVAAFTYE 234
            +  I   +  I+  S+NPAR+ GP L    + ++ LW ++      P++GAI+A   Y 
Sbjct: 168 CLTLIHLISIPISNTSVNPARSTGPALFVGDWAVSQLWLFW----AAPIIGAILAGVIYR 223

Query: 235 YLN 237
           Y N
Sbjct: 224 YFN 226