Pairwise Alignments

Query, 239 a.a., aquaporin family protein from Methanococcus maripaludis S2

Subject, 228 a.a., MIP family channel protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  112 bits (280), Expect = 6e-30
 Identities = 82/238 (34%), Positives = 119/238 (50%), Gaps = 25/238 (10%)

Query: 3   MIKKLIAECLGTGILVFFGPGAAAMTLMIANNTGTAGIGLLGGLGDWFAIGFSFAIAIAA 62
           M K+ +AE +GT  LVF G GAA    ++A      GIG       W  +  +F +++  
Sbjct: 1   MFKRTLAEFIGTYWLVFGGCGAA----LLAAGVPEVGIG-------WVGVSLAFGLSVLT 49

Query: 63  VIYTMGRISGAHINPAVTIGLWAVKKFPTKDTVLYIIAQLIG--AAIGSLLF-------F 113
           + Y +G ISG H NPAVT+GL    +F  KD   Y IAQL+G  AA G+L         F
Sbjct: 50  MAYAVGGISGGHFNPAVTLGLTIAGRFEAKDIPPYWIAQLLGGAAAAGTLFVIMSGQAEF 109

Query: 114 ACIGIDSVTIGGLGATAPFAGISYFQAILAEFIGTFLLMFVIMGVAVDKRAPDGFAGLVI 173
           A +G  S    G G  +P  G      ++AE + T + + VI+G A     P+GFA + I
Sbjct: 110 ASVG--SFASNGYGVASP-GGFGMMSGMIAEVVLTAVFVIVILG-ATSHMVPEGFAPIAI 165

Query: 174 GLTVGAIITTTGNIAGASLNPARTFGPYLIDSIYGL-NLWYYFPIYIIGPVLGAIVAA 230
           GL +  I   +  I   S+NPAR+    +      L  LW ++   + G V+GA++ A
Sbjct: 166 GLCLTLIHLISIPITNTSVNPARSTAMAIYADGPALGQLWLFWAAPLAGAVIGALIWA 223