Pairwise Alignments

Query, 217 a.a., cytochrome c biogenesis CcdA family protein from Methanococcus maripaludis S2

Subject, 610 a.a., thiol:disulfide interchange protein DsbD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 7/215 (3%)

Query: 3   LFLIFLAGISTALGPCIVTVLPFVLAYTFGISN--SRFEGFLVSFSFMVGFSIVFSTLGV 60
           L + F  GI  AL PC+  + P +     G     S  + F +S +++ G +I +S LG+
Sbjct: 201 LVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFTLSMAYVQGMAITYSILGL 260

Query: 61  LSSAFGIFLNFTLLK-YIAGSFAIIFGILVLFNKNFTFRKEGVFQKFSKKLSNMNDISLH 119
           + ++ G+     L    +    AI+F +L L    F      +  +F +K++++++    
Sbjct: 261 VVASAGMKYQAALQHPAVLVVLAILFFVLSL--SMFGLYDLKLPSRFQEKMNSISNNQKG 318

Query: 120 VKILNSIVLGIVYGFGANICADPILAGILTFVASKADVYYGFFALLTYSLGYGIPIIFLS 179
             ++   ++G++ G  A+ C    L+G L +VA   D+  GF AL   S+G G+P++ + 
Sbjct: 319 GNLIGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGVPLLIIG 378

Query: 180 TLGAESKQIVEKIVKKKFITYISGIILIILGLFLI 214
           T G   K +         I  + G +LI + + ++
Sbjct: 379 TSG--GKLLPRAGAWMNIIKTVFGFLLIAVSIVML 411