Pairwise Alignments

Query, 287 a.a., succinate--CoA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 702 a.a., acetate--CoA ligase family protein from Methanococcus maripaludis JJ

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 16/244 (6%)

Query: 15  ITGNQGRFHTKNMLECKTNLLAGVTPGKGGQDVYGVPVYDTVLETVEKYDANASLIFIPA 74
           I G  G+   KN+L  K +        K   +VYG+  Y +VL+  E  D    +I IPA
Sbjct: 21  IEGKVGQSVMKNLLNFKQHGGKVYPVNKKYNEVYGIKCYGSVLDIPETPDL--VIISIPA 78

Query: 75  PFVKDAAYEAIDAGVELVTIIT-------EHIPIQDSMDIVAYGKKHGVNIIGPNTPGLA 127
            +  DA  E    GV+   IIT        H+ ++D +  ++  +++G+  IGPN  G+ 
Sbjct: 79  EYAVDAMEECGRKGVKAAIIITAGFAETNNHV-LEDRLKAIS--EQYGIRTIGPNCLGVI 135

Query: 128 SPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTLSNYGQSSCVGIGGDPVTGLRY 187
           +              K GNI  +S+SG +   +       N G S  V +G      ++ 
Sbjct: 136 NLHNHLNASFSKEFSKMGNIAFISQSGAIMTALLDIANYYNLGFSKIVSMGNK--IDVQE 193

Query: 188 IEVLEMFENDPETDAVVMVGEIGGNAEEDAAKKMISKMKKPVISYIAGQSAPEGK-RMGH 246
            E+L   ENDP T  V +  E   + +  +A K IS+ KKPVI   +G+S    K    H
Sbjct: 194 YELLNYLENDPHTKVVALYIEGLKDEKFISAAKKISR-KKPVIVLKSGKSEEGAKAASSH 252

Query: 247 AGAI 250
            G++
Sbjct: 253 TGSL 256



 Score = 29.3 bits (64), Expect = 3e-04
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 132 GKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTLSNYGQSSCVGIGGDPVTGLRYIEVL 191
           G  G++    +++  + +   S T   E+   L  ++ G S+ + + GD     RY    
Sbjct: 306 GGFGVLAADSVEKCGLELADFSATTVSELKKYLPDTS-GISNPLDLIGDADVN-RYKHAF 363

Query: 192 EMFENDPETDAVVMVGEIGGNAEEDAAKKMISKMKKPVI----------SYIAGQSAPEG 241
           E+ ENDP  D ++ +    G  +     + + K+K  +I          S++ G S  E 
Sbjct: 364 ELVENDPNVDGLLAILTPQGMTDALGVARELVKLKNYMICKKDKIPIVASFVGGTSVLEA 423

Query: 242 K 242
           +
Sbjct: 424 R 424