Pairwise Alignments

Query, 287 a.a., succinate--CoA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 290 a.a., succinyl-CoA synthase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  300 bits (768), Expect = 2e-86
 Identities = 146/283 (51%), Positives = 201/283 (71%)

Query: 2   ILLDENTRAIVQGITGNQGRFHTKNMLECKTNLLAGVTPGKGGQDVYGVPVYDTVLETVE 61
           +L++++T+ I QG TG QG FH++  ++  T ++ GV+PGKGG +  G+PV++TV + V 
Sbjct: 3   VLINKDTKVICQGFTGGQGTFHSQQAIDYGTQMVGGVSPGKGGSEHLGLPVFNTVKDAVA 62

Query: 62  KYDANASLIFIPAPFVKDAAYEAIDAGVELVTIITEHIPIQDSMDIVAYGKKHGVNIIGP 121
              A AS+I++PAPF KDA  EAID G+EL+  ITE IP  D + +    ++ GV +IGP
Sbjct: 63  ATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKLEETGVRMIGP 122

Query: 122 NTPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTLSNYGQSSCVGIGGDP 181
           N PG+ +P   K+GI+P  I  +G +G+VSRSGTLTYE   Q T   +GQS+CVGIGGDP
Sbjct: 123 NCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGGDP 182

Query: 182 VTGLRYIEVLEMFENDPETDAVVMVGEIGGNAEEDAAKKMISKMKKPVISYIAGQSAPEG 241
           + G  +I+VLEMF+NDP+T+A+VM+GEIGG AEE+AA  + + + KPV+SYIAG +AP G
Sbjct: 183 IPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKAHVTKPVVSYIAGVTAPAG 242

Query: 242 KRMGHAGAIIEKGVGTAKSKMQALENAGAHVAKRISDIPLLLK 284
           KRMGHAGAII  G GTA  K  ALE AG    + ++DI   L+
Sbjct: 243 KRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKALR 285