Pairwise Alignments

Query, 306 a.a., adenosylcobinamide-phosphate synthase CbiB from Methanococcus maripaludis S2

Subject, 303 a.a., putative cobalamin biosynthesis protein CobD from Phaeobacter inhibens DSM 17395

 Score =  105 bits (262), Expect = 1e-27
 Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 24/299 (8%)

Query: 1   MINPIYLILADFFDRYIGEP----PEKVHPVVFIGKLISFFENVFKSTNSVNKNRDLLFG 56
           M     LI A   D   GEP        HP V +G+ +S  +    +T    K R    G
Sbjct: 1   MTTAALLIPALLLDAIFGEPRWLWSRLPHPAVLMGRAVSLVDQTL-NTGKQRKAR----G 55

Query: 57  FLNVVLVLAIVFFMAFEIEQAINSISNSYIRISLYSIILSFSIGHKSLIEFSKSPIKFIV 116
            L + L++    ++ + +     ++    ++I + +I+L+     +SL +  ++ +   +
Sbjct: 56  VLAITLLVVSAGWLGWLL-----TLFGPLVQILIAAILLA----QRSLCDHVEA-VADGL 105

Query: 117 NNDLESAKKSVQCIVSRNTNELDKKHVLSASIESASENITDSIIAPLIYAAIFGLPGAFL 176
             DL   +++V  IVSR+T  +    +  ++IES +EN +D ++AP  +  + GLPG  +
Sbjct: 106 RLDLTEGREAVAMIVSRDTTGMTTPQIARSAIESGAENFSDGVVAPAFWFLVGGLPGLMI 165

Query: 177 YRAVNTFDAMIGYKSEKYLYYGKTAAYLDDILNFIPSRIAGMLLIISAPFYGGNVKSALL 236
           Y+  NT D+MIGYK+ ++  +G  +A LDD LN IP+R++ +++ I      G V  +  
Sbjct: 166 YKITNTADSMIGYKTPRHKNFGWASARLDDALNLIPARLSALMIAIV-----GLVLRSWS 220

Query: 237 GYFNEGSKTPSPNSGYTMATLANSLSMELEKIGYYKLGKGEITVEKALNSLKAVDYSVL 295
               +  +  SPN+G+  A +A +L + L     Y     E     A  S  A  +S++
Sbjct: 221 DITQDARRHRSPNAGWPEAAMARALRIALAGPRSYDGKLQEFAWVNASGSKSASAHSIM 279