Pairwise Alignments

Query, 469 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB from Methanococcus maripaludis S2

Subject, 504 a.a., aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B from Phaeobacter inhibens DSM 17395

 Score =  264 bits (675), Expect = 4e-75
 Identities = 170/496 (34%), Positives = 263/496 (53%), Gaps = 45/496 (9%)

Query: 4   DLSMKCGLEIHVQVDTNSKLFCQCPTNYKDVEPNTNICPVCIGHPGAKPMPPNKKAIDVA 63
           D  +  G+E+H QV +N+KLF    T +   EPN+N+  V    PG  P+  N   ++ A
Sbjct: 20  DWELVIGMEVHAQVSSNAKLFSGASTKF-GAEPNSNVAFVDAAMPGMLPVI-NDYCVEQA 77

Query: 64  IMVAKMLDCEMVIDKDIYFQRKHYNYPDLPSGYQ------------KTSVPIGEHGTFLG 111
           +     L  +  I+    F RK+Y YPDLP GYQ            +  V +G+ GT   
Sbjct: 78  VRTGLGLKAD--INLWSAFDRKNYFYPDLPQGYQISQLYHPIVGEGEVLVELGD-GTARN 134

Query: 112 VGITEVHLEEDPGQ----YKPDLGTVDYNRSGTPLIEIVTDPDMKSPEEAREFLRQLMRL 167
           V +  +H+E+D G+      P++  VD NR+G  L+EIV+ PD++ PEEA  ++ +L ++
Sbjct: 135 VRVERIHMEQDAGKSIHDMDPNMSFVDLNRTGVCLMEIVSRPDIRGPEEAAAYIAKLRQI 194

Query: 168 FRYIGHLRGE---GTMRADTNISI-------KYNGIQ-----GNRVEVKNVNSIRGVYKV 212
            +Y+G   G    G +RAD N+S+       KY   Q     G R E+KN+NS+R + + 
Sbjct: 195 MQYLGTCDGNMQNGNLRADVNVSVCRPGQYEKYQETQDFSHLGTRCEIKNMNSMRFIQQA 254

Query: 213 LKYELIRQKNVLRRGGEIKMETRAFMESQMITKGMRSKETADDYRYIPDPDLQPIVLNNN 272
           +  E  RQ  ++  GG I  ETR +   +  T+ MRSKE A DYRY PDPDL P+ +   
Sbjct: 255 IDVEARRQIAIIEAGGTIDQETRLYDPDKGETRSMRSKEEAHDYRYFPDPDLLPLEIEQA 314

Query: 273 WVEKVEAQMPETPMNKEKRFVEQYGIKEDDAKVLVSDLELADVFEKVVAELGNDKNGISL 332
           WV+ + A +PE P  K+ RF++ +G+ + DA VL +D+E A  FE    +    ++G  L
Sbjct: 315 WVDDIAANLPELPDEKKARFIKDFGLSDYDASVLTADVESATFFE----QTAKGRSG-KL 369

Query: 333 AVTWIRNEL-KRVLVYNKIEFFETNLKPEHMVELINSIKDKTISQKIGKTIIEQMVEHKG 391
           A  W+ NEL  R+      +  ++ + P  +  +I+ I    IS KI K + E +    G
Sbjct: 370 AANWVINELFGRLKKDEDKQITDSPVSPAQLGGIIDLISSDAISGKIAKDLFEIVYTEGG 429

Query: 392 EKTPKELITEMGLTVIEDTSELEKACEEAIKNSEKAVEDYKSGNQRALNSVVGQVMKLTR 451
           +  P +++ E G+  + DT  +E A +E I  +   VE  K  N +     VGQVMK T 
Sbjct: 430 D--PAQIVEERGMKQVTDTGAIEAALDEIIAANPAQVEKAKV-NPKLAGWFVGQVMKATG 486

Query: 452 GRAEPGTVVKILKKKI 467
           G+A P  V +++ KK+
Sbjct: 487 GKANPKAVNELVAKKL 502