Pairwise Alignments

Query, 336 a.a., AI-2E family transporter from Methanococcus maripaludis S2

Subject, 364 a.a., Predicted permease from Pseudomonas stutzeri RCH2

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 77/338 (22%), Positives = 150/338 (44%), Gaps = 31/338 (9%)

Query: 5   EYRFLMRIFVLISFLSVMIIAFPFLDTIAFACAFAYMTEPFFSALKKYTGRTLGA----- 59
           E +  + + V++S L+   I  PF   + +A   A +    F+ L++Y  R L       
Sbjct: 7   EQKVFLALLVVVS-LAFGWILLPFYGAVFWAVILAII----FAPLQRYLHRRLNQRRNLA 61

Query: 60  -----ILCILMITVPAIILVFLILTD---IFEFLNS--LDYAGFV----DYTVQFINYIG 105
                ++C+L+  +P I+   +++ +   +++ + S  LD   +V    D   Q +  + 
Sbjct: 62  AFVTLLVCLLVAVLPVILTTGMLVQEGATLYKQIESGELDIGSWVARLRDLLPQSVQ-LQ 120

Query: 106 LQNIAKEDLSSILSEIWNFLKPTVNKMAGQIY----GLPLLFIKGLVTVFLTYYFLKDGY 161
           LQ     DL S+   + +        +A + +    G     I   V ++L ++F++DG 
Sbjct: 121 LQRFGFGDLESMRERLASGALEGSQFLATKAFSFGQGTFQFLISFFVMLYLLFFFIRDGR 180

Query: 162 RFKDAVMPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPV 221
                +   +P +   Q      K     +     N + A T G +    F  +G+   +
Sbjct: 181 ELVARIRKAIP-LSDAQKRRLFNKFTRVVRATVKGNIVVAITQGALGGIIFAVLGISGAL 239

Query: 222 TLGALSGILTLLPIVGGWTIYMPLSVYYIAVGMYSKAILLFGFGVLFLSLAPDFVIRPRL 281
             G L   L+LLP VG   I+ P+++Y++  G   + ++L  +G+L + L  D ++RP L
Sbjct: 240 LWGVLMAFLSLLPAVGAGLIWTPVAIYFLMTGAIWQGVVLTLYGILVIGLV-DNILRPIL 298

Query: 282 VNHESSIHPAFALVAFLMGPLALGITGFALGPLIMGTF 319
           V  ++ +     L++ L G    G+ GF +GPL+   F
Sbjct: 299 VGKDTKMPDYVVLISTLGGLALFGLNGFVIGPLVAALF 336