Pairwise Alignments

Query, 336 a.a., AI-2E family transporter from Methanococcus maripaludis S2

Subject, 373 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 5/228 (2%)

Query: 97  TVQFINYIGLQNIAKEDLSSILSEIWNFLKPTVNKMAGQIYGLPLLFIKGLVTVFLTYYF 156
           T+Q+  +IG  +   + +S+I  +    +   V ++     GL L  +  L+T+F  Y  
Sbjct: 120 TLQWQQFIGEPHELGQIVSAISGQNLTGISRWVLQLGWNTLGLLLTLLFMLITLFFLY-- 177

Query: 157 LKDGYRFKDAVMPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIG 216
            KDG      V      +   +   F R +     +  +   L A   G++    +W  G
Sbjct: 178 -KDGESVAKQVDVVGERILPARWYRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAG 236

Query: 217 LPNPVTLGALSGILTLLPIVGGWTIYMPLSVYYIAVGMYSKAILLFGFGVLFLSLAPDFV 276
           +P+ V  G L+  + L+P  G  T++  +S+Y +  G  +  + LF +G + L +  D  
Sbjct: 237 VPSAVAFGVLTAFMALIP-GGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIV-DKT 294

Query: 277 IRPRLVNHESSIHPAFALVAFLMGPLALGITGFALGPLIMGTFDAIFR 324
           +RP LV     +         + G   +G  G  +GP++M    AI+R
Sbjct: 295 LRPNLVGGPIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWR 342