Pairwise Alignments

Query, 336 a.a., AI-2E family transporter from Methanococcus maripaludis S2

Subject, 368 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 70/336 (20%), Positives = 133/336 (39%), Gaps = 27/336 (8%)

Query: 11  RIFVLISFLSVMIIAFPFLDTIAFACAFAYMTEPFFSALKKYTG------RTLGAILCIL 64
           R  +++   + +     FL     A    + + P +  L    G       T+  +L I+
Sbjct: 12  RTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMAKCGGRSALSATIALVLIIV 71

Query: 65  MITVPAIILVFLILTDIFEFLNSLDYAGFVD----------------YTVQFINYIGLQN 108
            +  P I +    L +I  ++  L YA                     T+Q+  +IG  +
Sbjct: 72  GLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQWQQFIGEPH 131

Query: 109 IAKEDLSSILSEIWNFLKPTVNKMAGQIYGLPLLFIKGLVTVFLTYYFLKDGYRFKDAVM 168
              + +S+I  +  + +   V ++     GL L  +  L+T+F  Y   KDG      + 
Sbjct: 132 ELGKIVSAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLY---KDGESVAKQLD 188

Query: 169 PHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTLGALSG 228
                +   +   F R +     +  +   L A   G++    +W  G+P+ V  G L+ 
Sbjct: 189 IVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAFGVLTA 248

Query: 229 ILTLLPIVGGWTIYMPLSVYYIAVGMYSKAILLFGFGVLFLSLAPDFVIRPRLVNHESSI 288
            + L+P  G  T++  +S+Y +  G  +  + LF +G + L +  D  +RP LV     +
Sbjct: 249 FMALVP-GGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIV-DKTLRPNLVGGPIKL 306

Query: 289 HPAFALVAFLMGPLALGITGFALGPLIMGTFDAIFR 324
                    + G   +G  G  +GP++M    AI+R
Sbjct: 307 PFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWR 342