Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 273 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (274), Expect = 4e-29
 Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 16/263 (6%)

Query: 11  LIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAF--NFRGFNITIP 68
           ++G+P+ HS SP++H    +       Y         L+D    A+ F    RG N+T+P
Sbjct: 6   VMGNPIGHSKSPLIHRLFAEQTGQTLDYSTLLAP---LEDFAGCAREFFHEGRGANVTVP 62

Query: 69  HKMNIMKYLDEIDCDAEAIGAVNTV-KIENGKAIGYNTDGIGVKKALEEKTGI-LINKNI 126
            K +  +  D +   A+  GAVNT+ K+ +G+ +G NTDG G+ + L    G  L  K I
Sbjct: 63  FKEDAFRLADTLTERAQRAGAVNTLSKLADGRLLGDNTDGAGLVRDLTVNAGFSLKGKRI 122

Query: 127 LIIGSGGASRAVSFELAKDN--NLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINI 184
           L++G+GGA R     L  +   ++ I NR +EKAE L+ E+   L    P++  G D   
Sbjct: 123 LLLGAGGAVRGALEPLLAEAPASVIIANRTVEKAELLA-ELFADL---GPVSASGFDWLQ 178

Query: 185 ENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAK-TI 243
           E  D+IIN T   +    +V P+          V  D++Y      F + A ++GA  ++
Sbjct: 179 EPVDLIINATSASL--SGDVPPIAASLIDPGKTVCYDMMYGKEPTSFCRWASEHGAAVSM 236

Query: 244 NGIGMLVYQGAVSFEIWTGIKPD 266
           +G+GML  Q   +F +W G++PD
Sbjct: 237 DGLGMLAEQAGEAFFLWRGVRPD 259