Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 284 a.a., shikimate dehydrogenase from Pseudomonas syringae pv. syringae B728a

 Score =  123 bits (308), Expect = 5e-33
 Identities = 82/268 (30%), Positives = 133/268 (49%), Gaps = 13/268 (4%)

Query: 8   LVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSE-----ENLKDVVAGAKAFNFRG 62
           L GLIG  +  S +P MH        + Y Y   D+         L  ++ GA+   F G
Sbjct: 10  LAGLIGSGIQASRTPAMHEHEGDAQGMRYLYRLIDIDALQLDIHALPQLLEGARQCGFTG 69

Query: 63  FNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGILI 122
            NIT P K  ++  LDE+  +A  IGAVNTV  ++GK IG+NTD +G  +  +       
Sbjct: 70  LNITFPCKQAVIPLLDELSDEARGIGAVNTVVFKDGKRIGHNTDCLGFAEGFQRGLDKAP 129

Query: 123 NKNILIIGSGGASRAVSFEL--AKDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGL 180
            + ++ +G+GGA  AV+  L  A    L++     ++A+ L   +++            L
Sbjct: 130 RQQVVQMGAGGAGAAVAHALLSAGVERLSVFEVEPQRAQGLVDNLNQHFGAGRAQVGTDL 189

Query: 181 DINIENFDIIINTTPVGM--YPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKY 238
              +   D ++NTTPVGM   P T     +P+  ++ +  V ++IY PLE   L+ A+  
Sbjct: 190 PAAMAEADGLVNTTPVGMTKLPGTP----LPVELLRPELWVAEIIYFPLETELLRHARAL 245

Query: 239 GAKTINGIGMLVYQGAVSFEIWTGIKPD 266
           G +T++G  M V+Q   +FE+++G   D
Sbjct: 246 GCRTLDGSTMAVFQAVKAFELFSGQSAD 273