Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 274 a.a., shikimate dehydrogenase from Pseudomonas syringae pv. syringae B728a

 Score =  116 bits (291), Expect = 5e-31
 Identities = 86/263 (32%), Positives = 133/263 (50%), Gaps = 16/263 (6%)

Query: 11  LIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAF--NFRGFNITIP 68
           + G+P+ HS SP++H    +       Y     S   L D  A A+AF    RG N+T+P
Sbjct: 6   VFGNPIGHSKSPLIHRLFAEQTGQTLDY---QTSLAPLDDFTAFAQAFFQAGRGANVTVP 62

Query: 69  HKMNIMKYLDEIDCDAEAIGAVNTV-KIENGKAIGYNTDGIGVKKALEEKTG-ILINKNI 126
            K    +  D +   A+  GAVNT+ K+++G  +G NTDG G+ + L    G  L  + I
Sbjct: 63  FKEQAWRLADSLTQRAQRAGAVNTLSKLDDGTLLGDNTDGAGLVRDLTVNCGRSLRGQRI 122

Query: 127 LIIGSGGASRAVSFELAKDNN--LTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINI 184
           L++G+GGA R     L       L I NR +EKAE L++E +       P+     D   
Sbjct: 123 LLLGAGGAVRGALEPLLGQQPAALVIANRTVEKAERLAQEFADL----GPVFASSFDWLE 178

Query: 185 ENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGA-KTI 243
           E+ D+IIN T   +    E+ P+ P           D++Y+     F + A ++GA + +
Sbjct: 179 ESVDVIINATSASLAG--ELPPIAPSLIQPGVTFCYDMMYSNEPTAFCRWATEHGAAQAV 236

Query: 244 NGIGMLVYQGAVSFEIWTGIKPD 266
           +G+GMLV Q A +F +W G++PD
Sbjct: 237 DGLGMLVEQAAEAFLLWRGVRPD 259