Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 288 a.a., shikimate 5-dehydrogenase from Synechococcus elongatus PCC 7942

 Score =  159 bits (403), Expect = 5e-44
 Identities = 89/266 (33%), Positives = 145/266 (54%), Gaps = 6/266 (2%)

Query: 2   INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
           +  +T+L+G+IG P++HS SP++ NAAI +L ++Y Y  F V   +L   +AG  A   +
Sbjct: 4   LTGRTRLLGIIGDPIEHSLSPLIQNAAIAELGLDYCYVPFPVKGADLATALAGLAAIGVQ 63

Query: 62  GFNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGIL 121
           GFN+TIPHK  +M  L ++   A+++G+VNTV       +G NTD +G    L+      
Sbjct: 64  GFNVTIPHKQAVMPLLSQVSELAQSVGSVNTVWQTEQGWVGTNTDVLGFLAPLQTLRSDW 123

Query: 122 INKNILIIGSGGASRAV---SFELAKDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYG 178
               ++++G GGA+RAV     +L      T+V R+ +K +   +    +       ++ 
Sbjct: 124 SGCRVVLLGCGGAARAVVAGCLQLGCSAIATVV-RDAQKGDAFQQSWGDRADSLTIHDWS 182

Query: 179 GLDINIENFDIIINTTPVGMYPHTEVEPV--IPLNNIKKDAVVMDLIYNPLEPVFLKEAK 236
            +   +   D+++NTTP+GM PH E  P+       ++ + +  DLIY P    FL++A 
Sbjct: 183 DIPDVLSTADLVVNTTPLGMDPHIERSPLDNSAAQQLRPETIAYDLIYTPSPTRFLQQAI 242

Query: 237 KYGAKTINGIGMLVYQGAVSFEIWTG 262
             G   I+G+ MLV QGA   +IWTG
Sbjct: 243 AQGCHAIDGLEMLVQQGAAGLKIWTG 268