Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 286 a.a., shikimate 5-dehydrogenase from Sinorhizobium meliloti 1021

 Score =  135 bits (341), Expect = 8e-37
 Identities = 90/269 (33%), Positives = 140/269 (52%), Gaps = 12/269 (4%)

Query: 13  GHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKA--FNFRGFNITIPHK 70
           G+PV HS SP++H   +K   I   Y A +V+ E   D +   K    +F G N+TIPHK
Sbjct: 16  GYPVKHSRSPLIHGHWLKQFGIRGSYRAHEVTPEAFPDFMRQIKEGRTDFCGGNVTIPHK 75

Query: 71  MNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKT-GILINKNILII 129
               +  D  D  +  +GA NT+ +ENGK    NTDG G    L+E+  G       +I+
Sbjct: 76  EAAFRLADRPDELSAELGAANTLWLENGKIRATNTDGRGFVANLDERAKGWDRISAAVIL 135

Query: 130 GSGGASRAVSFELAKDNNLT---IVNRNIEKAENLSKEISRKLKKENPLNYGGLDINIEN 186
           G+GGASRAV  +  +D  +    +VNR  E+A  L+      +   +      L   +  
Sbjct: 136 GAGGASRAV-IQAIRDRGVKTIHVVNRTPERARELADRFGTAVHAHS---MAALPEVVSG 191

Query: 187 FDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKTINGI 246
             + +NTT +GM    E  P I  + +  DAVV D++Y PL+   L++A++ G + ++G+
Sbjct: 192 AGLFVNTTSLGM--DGEPAPAIDFSGLAPDAVVTDIVYVPLKTPLLRQAEEQGFRIVDGL 249

Query: 247 GMLVYQGAVSFEIWTGIKPDIFVMKKSII 275
           GML++Q    FE W G++P +    + II
Sbjct: 250 GMLLHQAVPGFEKWFGLRPVVDETLRQII 278