Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 278 a.a., shikimate dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  128 bits (321), Expect = 2e-34
 Identities = 95/282 (33%), Positives = 138/282 (48%), Gaps = 15/282 (5%)

Query: 4   SKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGF 63
           S T    + G+P+ HS SP +H    K+      Y A     +   + V    A    G 
Sbjct: 5   SMTDRFAVFGNPISHSKSPQIHAMFAKETGQTLTYEAILAPLDGFAEAVTAFMAAGGCGA 64

Query: 64  NITIPHKMNIMKYLDEIDCDAEAIGAVNT-VKIENGKAIGYNTDGIGVKKALEEKTGILI 122
           N+T+P K       DE+  DA   GAVNT +K+ +G+  G NTDG+G+   L      L 
Sbjct: 65  NVTVPFKEQAFTLCDELSDDARIAGAVNTLIKLPDGRLRGDNTDGMGLVADLIRHGVELN 124

Query: 123 NKNILIIGSGGASRAVSFELAKDN-NLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLD 181
           NK +L++G+GGA+R     L +    LTI NR + KAE L    +    K N     G  
Sbjct: 125 NKRVLLVGAGGAARGALLPLVRAGAKLTISNRTLSKAEAL----AALCPKVNVEVISGSH 180

Query: 182 INIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAK 241
           I    FD+IIN+T   +       PVI  N I    V  D++Y     VF + A+  GAK
Sbjct: 181 IR-SPFDVIINSTSASLSGDL---PVIAANAIDNQTVCYDMMYGAKPTVFNEWARSLGAK 236

Query: 242 -TINGIGMLVYQGAVSFEIWTGIKPD----IFVMKKSIISKI 278
             I+G+GMLV Q A SF +W  ++P+    +  +++S+IS +
Sbjct: 237 ICIDGLGMLVGQAAESFYLWRRVRPNAAPVLQTLRQSLISGV 278