Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 276 a.a., shikimate dehydrogenase from Rhodanobacter denitrificans MT42

 Score =  115 bits (288), Expect = 1e-30
 Identities = 83/261 (31%), Positives = 124/261 (47%), Gaps = 10/261 (3%)

Query: 11  LIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNITIPHK 70
           + GHP+ HS SP +H A  +  +I   Y A DV        V    A   RG N+T+PHK
Sbjct: 8   VFGHPIAHSLSPTIHQAFARQFEIELTYRAIDVEPAGFAAAVRRFFADGGRGANVTLPHK 67

Query: 71  MNIMKYLDEIDCDAEAIGAVNTV-KIENGKAIGYNTDGIGVKKALEEKTGI-LINKNILI 128
                  DE    A   G+ N +  +  G+   +NTDG G+ + L E+ G+ L     L+
Sbjct: 68  AAAFALADERSVAATRAGSANVLAALVAGRLAAHNTDGDGLVRDLTERHGLDLRGHTALL 127

Query: 129 IGSGGASRAVSFEL--AKDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINIEN 186
           +G+GGA+  V++ L  A    LTIV+R    A+ L+  I    +      Y      I +
Sbjct: 128 LGAGGAAHGVAWNLLDAGVATLTIVSRTATSADALADAIGEPARAHT--RYWSDLAGIGS 185

Query: 187 FDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAK-TING 245
           +D+I+N T  G+     V   +P + +   A+  DL Y      FL  A   GA+   +G
Sbjct: 186 YDLIVNATSAGV---LGVSLQLPPSLVGARALCYDLSYGTAASSFLSWATAAGARYAFDG 242

Query: 246 IGMLVYQGAVSFEIWTGIKPD 266
           +GMLV   A +F +W G +PD
Sbjct: 243 LGMLVETAADAFALWHGRRPD 263