Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 272 a.a., shikimate 5-dehydrogenase from Rahnella sp. WP5

 Score =  105 bits (263), Expect = 8e-28
 Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 26/272 (9%)

Query: 2   INSKTKL-VGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNF 60
           IN  T+L + L G P   +F    HN+  + L +N+ Y AF  S ++++  V G +A   
Sbjct: 5   INKDTQLCMSLSGRP--GNFGTRFHNSLYQALDLNFVYKAF--STQDIEAAVKGVRALGI 60

Query: 61  RGFNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGI 120
           RG  +++P K   + +LDE+D  A AI +VNT+  ++G    YNTD I V K L+    +
Sbjct: 61  RGCAVSMPFKEACIPFLDELDPSATAIQSVNTIVNDDGLLRAYNTDYIAVAKLLDSHQ-V 119

Query: 121 LINKNILIIGSGGASRAV--SFELAKDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYG 178
             +    + GSGG  +AV  +   A      I+ RN      L++E   + K E      
Sbjct: 120 PRDAVFALRGSGGMGKAVVAAIRDAGFKKGYIIARNEANGRALAEEYGYEWKAE------ 173

Query: 179 GLDINIENFDIIINTTPVGMYPHTEV-----EPVIPLNNIKKDAVVMDLIYNPLEPVFLK 233
              +     D+++N TP+GM    EV     EP +    I + ++V D++  P+E   ++
Sbjct: 174 ---VGDVAVDMVVNVTPIGMAGGPEVDSLAFEPAV----IDRASIVFDVVALPVETPLIR 226

Query: 234 EAKKYGAKTINGIGMLVYQGAVSFEIWTGIKP 265
             +++G K I G  +   Q    F ++TG++P
Sbjct: 227 YGREHGKKVITGAEVATLQAVEQFVLYTGVRP 258