Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 277 a.a., shikimate dehydrogenase AroE from Phaeobacter inhibens DSM 17395

 Score =  139 bits (351), Expect = 5e-38
 Identities = 89/275 (32%), Positives = 141/275 (51%), Gaps = 20/275 (7%)

Query: 3   NSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRG 62
           +++  L G+IG PV HS SP++H   ++   I   Y    V    L++VV       F G
Sbjct: 3   DTRIPLAGVIGSPVAHSRSPLVHGHWLRTYGIAGHYVPLHVEPGQLEEVVRSLPKMGFVG 62

Query: 63  FNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIE-NGKAIGYNTDGIGVKKALEE----- 116
            NITIPHK  IM+  D++   A  IGA NT+    +G  +  NTDG G    L +     
Sbjct: 63  ANITIPHKEQIMEIADQVTDRATLIGAANTLIFRPDGSILADNTDGYGFITNLHQAAPDW 122

Query: 117 --KTGILINKNILIIGSGGASRAVSFELAKDN--NLTIVNRNIEKAENLSKEISRKLKKE 172
              TG  +     + G+GGASRAV   L +     + + NR  E+A+    E   +++  
Sbjct: 123 DPATGPAV-----VFGAGGASRAVIASLLEAGVPEILLSNRTRERADQFRSEFGSRIQVV 177

Query: 173 NPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFL 232
           + +  G +   IE   +++NTT +GM     +   +PL+ ++   VV DL+Y PL+   L
Sbjct: 178 DWVQVGNV---IEQAALLVNTTSLGMVGKPRLR--VPLDGLRSSTVVTDLVYTPLKTDML 232

Query: 233 KEAKKYGAKTINGIGMLVYQGAVSFEIWTGIKPDI 267
           + A+  G  T++G+GML++Q    FE W G +P++
Sbjct: 233 QWAEDIGCTTVDGLGMLLHQAVPGFERWFGKRPEV 267