Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 304 a.a., shikimate 5-dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  126 bits (317), Expect = 5e-34
 Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 11/261 (4%)

Query: 11  LIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNITIPHK 70
           + GHP+ HS SP +H A  K    + +Y A     +   + +        +G N+T+P K
Sbjct: 36  VFGHPIGHSKSPAIHQAFAKSTGESLQYEAILAPLDGFAESLRAFFEHGGKGANVTLPFK 95

Query: 71  MNIMKYLDEIDCDAEAIGAVNTV-KIENGKAIGYNTDGIGVKKALEEKTGILINKNILII 129
                  D +  +A+  GAVNT+ ++ +G+  G NTDG+G+   LE   G L  K++L+I
Sbjct: 96  EQAYALCDCLGDEAKLAGAVNTLTRLADGRIKGDNTDGLGLVADLERHLGSLCGKSVLLI 155

Query: 130 GSGGASRAVSFEL--AKDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINIENF 187
           G+GGA+R     L  A  ++LTI NR   KAE L++      K    +    LD    +F
Sbjct: 156 GAGGAARGAILPLLNAGIDSLTIHNRTHSKAEQLAE----AFKAYGQVKASTLDELTHSF 211

Query: 188 DIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGA-KTINGI 246
           DI+IN+T   +       P +P   I   +V  D++Y      F   A   GA +TI+G+
Sbjct: 212 DIVINSTSASLSGEL---PSLPKAIIAAHSVCYDMMYGRELTAFNHWALDQGASQTIDGL 268

Query: 247 GMLVYQGAVSFEIWTGIKPDI 267
           GMLV Q A SF IW G++P +
Sbjct: 269 GMLVGQAAKSFAIWRGVEPAV 289