Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 315 a.a., shikimate 5-dehydrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  139 bits (351), Expect = 6e-38
 Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 26/277 (9%)

Query: 7   KLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNIT 66
           +L G+IGHP+ H+ SP++HN     L +   Y A+ +    + D +   +    RG ++T
Sbjct: 10  ELYGIIGHPLGHTMSPLLHNWGFSLLDVPAVYMAWPLEPGRVGDFITAVRTLPIRGASVT 69

Query: 67  IPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGILIN-KN 125
           IPHK  ++  LD +   A A+GAVNT+   +G+ +G NTD  G    L ++       + 
Sbjct: 70  IPHKQAVLPLLDGVSDRARAVGAVNTLYWRDGQLLGENTDVTGFLAPLRQRAAAGWRCER 129

Query: 126 ILIIGSGGASRAVSFELAK--------DNNLTIVNRNIEKAENLSKEISRKLKKENPLNY 177
            L++G+GGA+RAV   L +           + +  RN EKA  L+ E   ++   +   +
Sbjct: 130 ALVLGNGGAARAVLAGLRELGPAGDGVVRAVGVTGRNAEKAAPLAAEFGAEVVDWDARVH 189

Query: 178 GGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAV----------VMDLIYNPL 227
            G        D+++NTTP+GM    + +   P        V            DL+YNPL
Sbjct: 190 WGA-------DLVVNTTPMGMSGERQGDTAFPEQGFAAQGVAAGGDGRRGLAYDLVYNPL 242

Query: 228 EPVFLKEAKKYGAKTINGIGMLVYQGAVSFEIWTGIK 264
              FL EA   G  T +G+GM V QG   F +WTG++
Sbjct: 243 RTRFLSEAADAGWDTQDGLGMFVEQGREQFRLWTGLE 279