Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 301 a.a., shikimate 5-dehydrogenase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  131 bits (329), Expect = 2e-35
 Identities = 82/259 (31%), Positives = 128/259 (49%), Gaps = 11/259 (4%)

Query: 7   KLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNIT 66
           +L G++GHP+ H+ SP++HN       +   Y A+ V        +   +     G ++T
Sbjct: 35  RLYGIVGHPLGHTLSPLLHNWGFALHSLPAVYMAWPVPPGRFASFMEAVRTLPVHGASVT 94

Query: 67  IPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGILINKNI 126
           IPHK   ++  D +   A A+GAVNT+ +E+G   G NTD  G    L  + G+ I++  
Sbjct: 95  IPHKEEALRLCDRVTDRARAVGAVNTLFLEDGVVCGENTDVTGFLAPLRAR-GVRIDE-A 152

Query: 127 LIIGSGGASRAVSFELAK--DNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINI 184
           L++G+GGA+RAV   L +     + I NR  +KA  L+      +   +        +  
Sbjct: 153 LVLGAGGAARAVLAGLVELGVRRVRISNRTHDKAMELAGAFGADVVPWDERGSAAAGL-- 210

Query: 185 ENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKTIN 244
                ++NTTP GM      E  +P        +  DL+YNPL   FL +A+  G +T +
Sbjct: 211 -----VVNTTPCGMQGARMGESPLPEGAFSGRGMAYDLVYNPLTTRFLADARAAGWETQD 265

Query: 245 GIGMLVYQGAVSFEIWTGI 263
           G+GM V QG   F IWTG+
Sbjct: 266 GLGMFVEQGREQFRIWTGL 284