Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 304 a.a., shikimate 5-dehydrogenase from Burkholderia phytofirmans PsJN

 Score =  131 bits (330), Expect = 2e-35
 Identities = 82/266 (30%), Positives = 139/266 (52%), Gaps = 9/266 (3%)

Query: 8   LVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLK-----DVVAGAKAFNFRG 62
           LVGLIG  +  S +P MH      L ++Y Y   D+    L      D++  A+   F G
Sbjct: 27  LVGLIGAGIGGSLTPAMHEEEGSKLGLHYVYRRIDLEALKLDVAALPDLLMAAERMGFNG 86

Query: 63  FNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGILI 122
            NIT P K  ++  LDE+  DA A+GAVNTV  ++G+ IG+NTD  G  +A +     + 
Sbjct: 87  LNITYPCKQAVIPLLDELSDDARALGAVNTVLFKDGRRIGHNTDWSGFARAFQRGLPDVS 146

Query: 123 NKNILIIGSGGASRAVSFELAK--DNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGL 180
            + ++ +G+GGA  AV+         +LT+ + +  +A +L+ E+ ++           L
Sbjct: 147 LERVVQLGAGGAGAAVAHAALNMGAKSLTLFDVDATRAASLADELQKRFPAAAVGAGSSL 206

Query: 181 DINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGA 240
             ++   + +I+ TP GM     +   +P+  + +D  V D++Y P+    L+ A+  G 
Sbjct: 207 AESLAAANGLIHATPTGMAKLPGLP--LPVELLHRDLWVADIVYFPIRTALLQAAEALGC 264

Query: 241 KTINGIGMLVYQGAVSFEIWTGIKPD 266
           +T++G GM VYQ   +  I+TG++PD
Sbjct: 265 RTLSGGGMAVYQAVDAMRIFTGLEPD 290