Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 292 a.a., shikimate 5-dehydrogenase (RefSeq) from Shewanella sp. ANA-3

 Score =  106 bits (265), Expect = 5e-28
 Identities = 86/285 (30%), Positives = 135/285 (47%), Gaps = 31/285 (10%)

Query: 11  LIGHPVDHSFSPIMHN--AAIKDLKINYRYFA--FDVSEENLKDVV-AGAKAFNFRGFNI 65
           + G+P+ HS SP +H   A++    ++Y       D  E +L+    AG K     G N+
Sbjct: 17  VFGNPIGHSKSPFIHGQFASLTQQTLSYEAILAPIDGFEASLRAFFQAGGK-----GANV 71

Query: 66  TIPHKMNIMKYLDEIDCDAEAIGAVNTVKI-ENGKAIGYNTDGIGVKKALEEKTGILINK 124
           T+P K       D +  +A   GAVNT+ +  +G   G NTDG+G+   L    G L +K
Sbjct: 72  TVPFKEQAFALCDSLSAEATLAGAVNTLSLLADGTIYGDNTDGLGLVADLVRHLGSLQHK 131

Query: 125 NILIIGSGGASRAVSFEL--AKDNNLTIVNRNIEKAENL--------SKEISRKLKKENP 174
            +L++G+GGA+R     L  A+   L I NR   KA+ L            S KL+  + 
Sbjct: 132 RVLLVGAGGAARGCILPLLKAEVGQLVITNRTQSKAQALVDIFSQVQEGRYSDKLQAVSM 191

Query: 175 LNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKE 234
               G+      FD++IN+T   +       P +  + I       D++Y      F + 
Sbjct: 192 SELSGV------FDLVINSTSASLAGEL---PPLSQSIIGNKTACYDMMYGAKPTAFNQW 242

Query: 235 AKKYG-AKTINGIGMLVYQGAVSFEIWTGIKPDIFVMKKSIISKI 278
           A + G A+ I+G+GMLV Q A SF +W G++PD   + K +  K+
Sbjct: 243 ALQQGAAQVIDGLGMLVGQAAKSFALWRGVEPDTSGVLKLLRDKL 287