Pairwise Alignments

Query, 123 a.a., response regulator from Methanococcus maripaludis S2

Subject, 249 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score = 69.3 bits (168), Expect = 3e-17
 Identities = 36/118 (30%), Positives = 68/118 (57%), Gaps = 4/118 (3%)

Query: 6   KTMIVDDSAFMRNILKRILSTTNKYVVIGEAANGADAIKMAEELQPDLISMDIVMPETDG 65
           + +++DD + +  ++   L  +   V   +A +G     +A +L PDLI +D+++P  DG
Sbjct: 4   RILVIDDDSAILELVAVNLEMSGYDV--RKAEDGIKGQALAVQLVPDLIMLDLMLPRVDG 61

Query: 66  ITATKAIK--EKTPEIKIVMCTSVDQEQKMIDAVNAGADGYIVKPFQAPKILEQFNKL 121
            T  + ++  E+T EI ++M T++ Q Q  ++  NAGAD Y+ KPF+  ++L +   L
Sbjct: 62  FTVCQRLRRDERTAEIPVLMLTALGQTQDKVEGFNAGADDYLTKPFEVEEMLARVRAL 119