Pairwise Alignments

Query, 123 a.a., response regulator from Methanococcus maripaludis S2

Subject, 486 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 74.7 bits (182), Expect = 1e-18
 Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 2/112 (1%)

Query: 4   IVKTMIVDDSAFMRNILKRILSTTNKYVVIGEAANGADAIKMAEELQPDLISMDIVMPET 63
           + K +IVDD   +R   +R+L+     V    A+ G   IK+  E  P+L+ MD+ MP  
Sbjct: 1   MAKILIVDDELQLRQSFQRLLAGEGHDV--RAASTGEQGIKLVREELPELVIMDVRMPGM 58

Query: 64  DGITATKAIKEKTPEIKIVMCTSVDQEQKMIDAVNAGADGYIVKPFQAPKIL 115
           DG+TA +AI+E    + +V+ T+    +  I+A   GA  YI+KPF+ P IL
Sbjct: 59  DGLTALRAIREIDARLPVVIMTAYSTTETAIEATKLGAFDYILKPFEIPDIL 110