Pairwise Alignments

Query, 123 a.a., response regulator from Methanococcus maripaludis S2

Subject, 1333 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 37/111 (33%), Positives = 70/111 (63%), Gaps = 6/111 (5%)

Query: 8    MIVDDSAFMRNILKRILSTTNKYVVIGEAANGADAIKMAEELQPDLISMDIVMPETDGIT 67
            +I++D+  +R  ++ +    ++Y V  EA NG + +++A+E  PDLI  D++MP  DG T
Sbjct: 1087 LIIEDNEDVREYIRSLF--ISRYAV-SEACNGEEGVRIAKEQLPDLIISDVMMPVKDGFT 1143

Query: 68   ATKAIK--EKTPEIKIVMCTSVDQEQKMIDAVNAGADGYIVKPFQAPKILE 116
              + I+  ++T  I I++ T+  ++  ++   N+GAD Y++KPF  P+IL+
Sbjct: 1144 CCREIRMQQETAHIPILILTARAEDADILQGCNSGADDYMMKPFN-PEILK 1193