Pairwise Alignments

Query, 123 a.a., response regulator from Methanococcus maripaludis S2

Subject, 921 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 70.1 bits (170), Expect = 7e-17
 Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 5/116 (4%)

Query: 8   MIVDDSAFMRNILKRILSTTNKYVVIGEAANGADAIKMAEELQPDLISMDIVMPETDGIT 67
           +I+DD+  +R+ +  +L T   Y VI EAA+G++ I+ A +  PDLI  D++MP  DGI 
Sbjct: 677 LIIDDNEDIRSYVHTLLHTD--YTVI-EAADGSEGIRKAMKYVPDLIISDVMMPGIDGIE 733

Query: 68  ATKAIKE--KTPEIKIVMCTSVDQEQKMIDAVNAGADGYIVKPFQAPKILEQFNKL 121
             + +K   +T  I +++ T+   +++ I   + GAD YI KPF +  +L +   L
Sbjct: 734 CCRRLKSELQTCHIPVILLTACSLDEQRIQGYDGGADSYISKPFSSQLLLARVRNL 789